Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLV07682.1 | KLV11580.1 | ABT57_17515 | ABT57_02290 | Isochorismatase; 2,3 dihydro-2,3 dihydroxybenzoate synthase; catalyzes the formation of 2,3 dihydro-2,3 dihydroxybenzoate and pyruvate from isochorismate; with Ent DEF is involved in enterobactin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.567 |
KLV10112.1 | KLV11580.1 | ABT57_05870 | ABT57_02290 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
KLV11580.1 | KLV07682.1 | ABT57_02290 | ABT57_17515 | Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Isochorismatase; 2,3 dihydro-2,3 dihydroxybenzoate synthase; catalyzes the formation of 2,3 dihydro-2,3 dihydroxybenzoate and pyruvate from isochorismate; with Ent DEF is involved in enterobactin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.567 |
KLV11580.1 | KLV10112.1 | ABT57_02290 | ABT57_05870 | Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
KLV11580.1 | KLV11581.1 | ABT57_02290 | ABT57_02295 | Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology. | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
KLV11580.1 | KLV11620.1 | ABT57_02290 | ABT57_02520 | Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
KLV11580.1 | KLV11674.1 | ABT57_02290 | ABT57_02285 | Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.581 |
KLV11581.1 | KLV11580.1 | ABT57_02295 | ABT57_02290 | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
KLV11620.1 | KLV11580.1 | ABT57_02520 | ABT57_02290 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
KLV11674.1 | KLV11580.1 | ABT57_02285 | ABT57_02290 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.581 |