STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLV06714.1Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)    
Predicted Functional Partners:
KLV06715.1
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.960
KLV09819.1
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.746
KLV08011.1
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.648
KLV06713.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.554
KLV06707.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.549
trmB
tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
    0.526
KLV06724.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.477
KLV10107.1
ATP-dependent endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.472
KLV06709.1
Arsenic resistance operon repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.461
atpE
ATP synthase F0F1 subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
    
  0.454
Your Current Organism:
Photobacterium ganghwense
NCBI taxonomy Id: 320778
Other names: DSM 22954, IMSNU 60287, JCM 12487, KCTC 12328, P. ganghwense, Photobacterium ganghwense Park et al. 2006, Photobacterium sp. HF_10, strain FR1311
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.