Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLV04695.1 | KLV04968.1 | ABT57_23245 | ABT57_22835 | Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.704 |
KLV04695.1 | KLV06545.1 | ABT57_23245 | ABT57_19310 | Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbon starvation protein CstA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
KLV04968.1 | KLV04695.1 | ABT57_22835 | ABT57_23245 | Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.704 |
KLV06545.1 | KLV04695.1 | ABT57_19310 | ABT57_23245 | Carbon starvation protein CstA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |