STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP49746.1Hypothetical protein. (226 aa)    
Predicted Functional Partners:
AKP49747.1
Short-chain dehydrogenase/reductase SDR.
       0.718
AKP53472.1
Hypothetical protein.
  
     0.592
AKP50089.1
PspC domain protein.
 
  
 0.543
AKP49748.1
Hypothetical protein.
       0.514
AKP49749.1
Methylated-DNA/protein- cysteinemethyltransferase.
       0.514
AKP50433.1
Hypothetical protein.
  
     0.509
AKP52804.1
Hypothetical protein.
  
 
   0.506
AKP50095.1
Hypothetical protein.
  
     0.504
AKP50643.1
PDZ/DHR/GLGF domain protein.
 
     0.481
AKP51625.1
Hypothetical protein.
  
     0.453
Your Current Organism:
Cyclobacterium amurskyense
NCBI taxonomy Id: 320787
Other names: C. amurskyense, Cyclobacterium amurskyense Nedashkovskaya et al. 2005 emend. Hahnke et al. 2016, KCTC 12363, KMM 6143, LMG 23026, LMG:23026
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.