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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP49842.1Bacterial membrane protein YfhO. (813 aa)    
Predicted Functional Partners:
AKP49843.1
Methyltransferase type 11.
       0.780
AKP49512.1
Putative membrane protein.
  
     0.766
AKP49844.1
Glycosyl transferase, group 1.
       0.726
AKP51979.1
Hypothetical protein.
  
     0.716
AKP51897.1
Hypothetical protein.
 
     0.702
AKP53681.1
Hypothetical protein.
  
     0.664
AKP51199.1
Surface antigen (D15).
  
     0.660
AKP52744.1
Metallophosphoesterase.
 
     0.653
AKP49845.1
Polysaccharide biosynthesis protein.
 
    0.652
AKP50475.1
Putative outer membrane protein.
 
     0.644
Your Current Organism:
Cyclobacterium amurskyense
NCBI taxonomy Id: 320787
Other names: C. amurskyense, Cyclobacterium amurskyense Nedashkovskaya et al. 2005 emend. Hahnke et al. 2016, KCTC 12363, KMM 6143, LMG 23026, LMG:23026
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