Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKP50114.1 | hemC | CA2015_0650 | CA2015_0684 | Hypothetical protein. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.499 |
AKP50114.1 | hemL | CA2015_0650 | CA2015_0914 | Hypothetical protein. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.499 |
AKP50373.1 | AKP53836.1 | CA2015_0915 | CA2015_4497 | LysM-repeat protein. | Long-chain-fatty-acid--CoA ligase. | 0.442 |
AKP50373.1 | guaA | CA2015_0915 | CA2015_0916 | LysM-repeat protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.601 |
AKP50373.1 | hemL | CA2015_0915 | CA2015_0914 | LysM-repeat protein. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.796 |
AKP50403.1 | AKP52001.1 | CA2015_0947 | CA2015_2590 | Uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.885 |
AKP50403.1 | AKP53781.1 | CA2015_0947 | CA2015_4439 | Uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family. | Glutamyl-tRNA reductase. | 0.449 |
AKP50403.1 | hemA | CA2015_0947 | CA2015_2463 | Uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.692 |
AKP50403.1 | hemC | CA2015_0947 | CA2015_0684 | Uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.988 |
AKP50403.1 | hemE | CA2015_0947 | CA2015_0664 | Uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.925 |
AKP50403.1 | hemL | CA2015_0947 | CA2015_0914 | Uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.628 |
AKP52001.1 | AKP50403.1 | CA2015_2590 | CA2015_0947 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family. | 0.885 |
AKP52001.1 | AKP53781.1 | CA2015_2590 | CA2015_4439 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Glutamyl-tRNA reductase. | 0.576 |
AKP52001.1 | hemA | CA2015_2590 | CA2015_2463 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.820 |
AKP52001.1 | hemC | CA2015_2590 | CA2015_0684 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.994 |
AKP52001.1 | hemE | CA2015_2590 | CA2015_0664 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.690 |
AKP52001.1 | hemL | CA2015_2590 | CA2015_0914 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.985 |
AKP53781.1 | AKP50403.1 | CA2015_4439 | CA2015_0947 | Glutamyl-tRNA reductase. | Uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family. | 0.449 |
AKP53781.1 | AKP52001.1 | CA2015_4439 | CA2015_2590 | Glutamyl-tRNA reductase. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.576 |
AKP53781.1 | hemA | CA2015_4439 | CA2015_2463 | Glutamyl-tRNA reductase. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.926 |
page 1 of 3