STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP50996.1Haloacid dehalogenase, type II. (223 aa)    
Predicted Functional Partners:
AKP50997.1
Hypothetical protein.
       0.744
AKP50995.1
Rhodanese-like domain protein.
  
    0.609
AKP50884.1
Macrophage infectivity potentiator-related protein.
 
     0.514
AKP50885.1
Transcriptional regulator, TetR family.
 
   
 0.513
AKP51089.1
Hypothetical protein.
    0.468
AKP51561.1
Membrane protein.
 
  
 0.449
AKP50994.1
DinB family protein.
       0.445
AKP53836.1
Long-chain-fatty-acid--CoA ligase.
  
 
 0.431
AKP51756.1
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.405
Your Current Organism:
Cyclobacterium amurskyense
NCBI taxonomy Id: 320787
Other names: C. amurskyense, Cyclobacterium amurskyense Nedashkovskaya et al. 2005 emend. Hahnke et al. 2016, KCTC 12363, KMM 6143, LMG 23026, LMG:23026
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