Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKP51412.1Cytochrome c class I. (586 aa)    
Predicted Functional Partners:
AKP54077.1
Cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.877
AKP51414.1
Amidohydrolase.
 
     0.840
AKP51416.1
L-seryl-tRNA(Sec) selenium transferase-related protein.
 
     0.763
AKP51417.1
Amidohydrolase.
 
     0.752
AKP51413.1
GGDEF domain protein (Selenocysteine protein).
 
     0.733
AKP51630.1
Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein.
  
     0.617
AKP50368.1
Amidohydrolase.
 
     0.570
AKP51341.1
Amidohydrolase.
  
     0.570
AKP51342.1
Amidohydrolase.
 
     0.563
AKP53580.1
Hydrolase.
  
     0.555
Your Current Organism:
Cyclobacterium amurskyense
NCBI taxonomy Id: 320787
Other names: C. amurskyense, Cyclobacterium amurskyense Nedashkovskaya et al. 2005 emend. Hahnke et al. 2016, KCTC 12363, KMM 6143, LMG 23026, LMG:23026
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