STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP51417.1Amidohydrolase. (413 aa)    
Predicted Functional Partners:
AKP51416.1
L-seryl-tRNA(Sec) selenium transferase-related protein.
 
  
 0.958
pyrD
Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
     
  0.900
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
  0.900
AKP51630.1
Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein.
 
  
 0.823
AKP51340.1
Beta-galactosidase.
 
  
 0.821
AKP53210.1
Aminotransferase class V.
 
  
 0.821
AKP51412.1
Cytochrome c class I.
 
     0.752
AKP51353.1
RidA.
 
     0.710
AKP53533.1
L-sorbosone dehydrogenase.
  
     0.620
AKP51413.1
GGDEF domain protein (Selenocysteine protein).
 
     0.616
Your Current Organism:
Cyclobacterium amurskyense
NCBI taxonomy Id: 320787
Other names: C. amurskyense, Cyclobacterium amurskyense Nedashkovskaya et al. 2005 emend. Hahnke et al. 2016, KCTC 12363, KMM 6143, LMG 23026, LMG:23026
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