STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP52030.1Von Willebrand factor type A. (321 aa)    
Predicted Functional Partners:
AKP50976.1
ATPase associated with various cellular activities AAA_3.
 
  
 0.802
AKP50291.1
Hypothetical protein.
 
     0.791
AKP52029.1
Tetratricopeptide repeat domain protein.
 
    0.772
AKP52028.1
Hypothetical protein.
 
    0.759
AKP52027.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.687
AKP51372.1
Hypothetical protein.
 
     0.609
AKP52026.1
Putative exported 24-amino acid repeat protein.
       0.557
AKP52031.1
TonB-dependent receptor plug.
       0.501
AKP52032.1
Hypothetical protein.
       0.500
Your Current Organism:
Cyclobacterium amurskyense
NCBI taxonomy Id: 320787
Other names: C. amurskyense, Cyclobacterium amurskyense Nedashkovskaya et al. 2005 emend. Hahnke et al. 2016, KCTC 12363, KMM 6143, LMG 23026, LMG:23026
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.