STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP52593.1Hypothetical protein. (702 aa)    
Predicted Functional Partners:
AKP52592.1
Transcription-repair coupling factor.
 
     0.762
AKP52591.1
Hypothetical protein.
 
     0.671
AKP52968.1
Cytochrome c oxidase polypeptide II.
  
     0.671
AKP49809.1
Permease for cytosine/purine.
  
     0.541
AKP52594.1
tRNA-t(6)A37 methylthiotransferase.
       0.538
AKP53554.1
Putative cytochrome c.
 
     0.538
AKP52807.1
Membrane-bound dehydrogenase domain protein.
  
     0.531
AKP49607.1
Amidohydrolase 2.
  
     0.509
AKP49606.1
Amidohydrolase 2.
  
     0.506
AKP53170.1
TonB-dependent receptor plug.
  
     0.500
Your Current Organism:
Cyclobacterium amurskyense
NCBI taxonomy Id: 320787
Other names: C. amurskyense, Cyclobacterium amurskyense Nedashkovskaya et al. 2005 emend. Hahnke et al. 2016, KCTC 12363, KMM 6143, LMG 23026, LMG:23026
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.