Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKP53457.1Cell division protein FtsX. (798 aa)    
Predicted Functional Partners:
AKP53456.1
ABC transporter ATP-binding protein.
 
 
 0.932
AKP53455.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.899
AKP53467.1
ABC transporter, ATP-binding protein.
 
 
 0.860
AKP53452.1
Multi-sensor signal transduction histidine kinase.
 
     0.835
AKP52739.1
Integral membrane sensor signal transduction histidine kinase.
 
     0.770
AKP53454.1
Outer membrane efflux protein.
 
   0.690
AKP53458.1
Hypothetical protein.
 
   
0.600
AKP53453.1
Two component, sigma54 specific, transcriptional regulator, Fis family.
 
     0.580
AKP53459.1
Putative ABC transporter permease.
 
   
0.549
AKP53460.1
Hypothetical protein.
 
    
0.525
Your Current Organism:
Cyclobacterium amurskyense
NCBI taxonomy Id: 320787
Other names: C. amurskyense, Cyclobacterium amurskyense Nedashkovskaya et al. 2005 emend. Hahnke et al. 2016, KCTC 12363, KMM 6143, LMG 23026, LMG:23026
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