STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP53467.1ABC transporter, ATP-binding protein. (222 aa)    
Predicted Functional Partners:
AKP53466.1
Hypothetical protein.
 
 
 0.987
AKP53461.1
Hypothetical protein.
 
 
 0.974
AKP52092.1
Cell division protein FtsX.
 
 0.971
AKP53458.1
Hypothetical protein.
 
 
 0.971
AKP53459.1
Putative ABC transporter permease.
 
 
 0.970
AKP52507.1
ABC transporter efflux protein.
 
 0.964
AKP49908.1
ABC transporter efflux protein.
 
 0.924
AKP53465.1
Putative FtsX-related transmembrane transport protein.
 
 
 0.912
AKP53464.1
Hypothetical protein.
 
 
 0.911
AKP53463.1
Cell division protein FtsX.
 
 
 0.910
Your Current Organism:
Cyclobacterium amurskyense
NCBI taxonomy Id: 320787
Other names: C. amurskyense, Cyclobacterium amurskyense Nedashkovskaya et al. 2005 emend. Hahnke et al. 2016, KCTC 12363, KMM 6143, LMG 23026, LMG:23026
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.