Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKP51130.1 | AKP53496.1 | CA2015_1695 | CA2015_4143 | Ferrichrome-iron receptor. | PepSY-associated TM helix domain protein. | 0.498 |
AKP51130.1 | AKP53892.1 | CA2015_1695 | CA2015_4556 | Ferrichrome-iron receptor. | Putative anti-sigma factor. | 0.431 |
AKP53495.1 | AKP53496.1 | CA2015_4142 | CA2015_4143 | Hypothetical protein. | PepSY-associated TM helix domain protein. | 0.773 |
AKP53495.1 | AKP53497.1 | CA2015_4142 | CA2015_4144 | Hypothetical protein. | TonB-dependent siderophore receptor. | 0.605 |
AKP53496.1 | AKP51130.1 | CA2015_4143 | CA2015_1695 | PepSY-associated TM helix domain protein. | Ferrichrome-iron receptor. | 0.498 |
AKP53496.1 | AKP53495.1 | CA2015_4143 | CA2015_4142 | PepSY-associated TM helix domain protein. | Hypothetical protein. | 0.773 |
AKP53496.1 | AKP53497.1 | CA2015_4143 | CA2015_4144 | PepSY-associated TM helix domain protein. | TonB-dependent siderophore receptor. | 0.871 |
AKP53496.1 | AKP53892.1 | CA2015_4143 | CA2015_4556 | PepSY-associated TM helix domain protein. | Putative anti-sigma factor. | 0.402 |
AKP53497.1 | AKP53495.1 | CA2015_4144 | CA2015_4142 | TonB-dependent siderophore receptor. | Hypothetical protein. | 0.605 |
AKP53497.1 | AKP53496.1 | CA2015_4144 | CA2015_4143 | TonB-dependent siderophore receptor. | PepSY-associated TM helix domain protein. | 0.871 |
AKP53497.1 | AKP53892.1 | CA2015_4144 | CA2015_4556 | TonB-dependent siderophore receptor. | Putative anti-sigma factor. | 0.507 |
AKP53892.1 | AKP51130.1 | CA2015_4556 | CA2015_1695 | Putative anti-sigma factor. | Ferrichrome-iron receptor. | 0.431 |
AKP53892.1 | AKP53496.1 | CA2015_4556 | CA2015_4143 | Putative anti-sigma factor. | PepSY-associated TM helix domain protein. | 0.402 |
AKP53892.1 | AKP53497.1 | CA2015_4556 | CA2015_4144 | Putative anti-sigma factor. | TonB-dependent siderophore receptor. | 0.507 |