STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP53643.1Hypothetical protein. (57 aa)    
Predicted Functional Partners:
AKP52126.1
Hypothetical protein.
  
     0.763
AKP49510.1
Hypothetical protein.
  
     0.746
AKP50968.1
Hypothetical protein.
  
     0.711
AKP51444.1
Hypothetical protein.
  
     0.684
AKP49710.1
Hypothetical protein.
  
     0.683
AKP51768.1
Cytochrome c-type biogenesis protein CcmE, heme chaperone; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
  
     0.680
AKP54012.1
Hypothetical protein.
  
     0.674
AKP51783.1
ABC transporter involved in cytochrome c biogenesis, CcmB subunit.
  
     0.667
AKP52725.1
Peptidase M50.
  
     0.628
AKP51098.1
Tetratricopeptide TPR_2 repeat-containing protein.
  
     0.626
Your Current Organism:
Cyclobacterium amurskyense
NCBI taxonomy Id: 320787
Other names: C. amurskyense, Cyclobacterium amurskyense Nedashkovskaya et al. 2005 emend. Hahnke et al. 2016, KCTC 12363, KMM 6143, LMG 23026, LMG:23026
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.