Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKP53676.1O-methyltransferase-like protein. (257 aa)    
Predicted Functional Partners:
AKP53677.1
ApaG domain protein.
  
    0.810
AKP50685.1
Geranylgeranylglyceryl phosphate synthase-like protein; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).
  
    0.727
AKP51719.1
N-acetylglucosaminyltransferase.
 
     0.724
AKP50141.1
Hypothetical protein.
  
     0.658
ung
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.630
AKP52198.1
Putative membrane protein.
  
     0.594
AKP53836.1
Long-chain-fatty-acid--CoA ligase.
   
 
 0.573
AKP50510.1
Putative membrane protein.
 
     0.557
AKP52086.1
Putative membrane protein.
  
     0.550
AKP51759.1
Rod shape-determining protein MreD.
  
     0.531
Your Current Organism:
Cyclobacterium amurskyense
NCBI taxonomy Id: 320787
Other names: C. amurskyense, Cyclobacterium amurskyense Nedashkovskaya et al. 2005 emend. Hahnke et al. 2016, KCTC 12363, KMM 6143, LMG 23026, LMG:23026
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