STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC578_5787Uncharacterized protein. (740 aa)    
Predicted Functional Partners:
AC578_1090
Nsp1_C domain-containing protein.
   
 0.991
AC578_7966
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.989
AC578_7376
RanBD1 domain-containing protein.
   
 0.968
AC578_8424
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.968
AC578_5332
Ubiquitin-like domain-containing protein.
    
 0.935
AC578_2212
RanBD1 domain-containing protein.
   
 0.905
AC578_1707
Uncharacterized protein.
    
 0.818
AC578_3209
Ubiquitin-like domain-containing protein.
    
 0.818
AC578_10132
Uncharacterized protein.
   
 0.810
AC578_11147
Uncharacterized protein.
   
 
 0.803
Your Current Organism:
Pseudocercospora eumusae
NCBI taxonomy Id: 321146
Other names: Mycosphaerella eumusae, Mycosphaerella eumusae Crous & Mour., 2002, P. eumusae, PREM 57315, Pseudocercospora eumusae Crous & Mour., 2002, Septoria eumusae, Septoria eumusae Carlier, M.-F. Zapater, Lapeyre, D.R. Jones & Mour., 2000
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