STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH51014.1Putative peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (162 aa)    
Predicted Functional Partners:
tsaA
Putative peroxiredoxin.
   
 0.874
CUH51323.1
Thioredoxin 2.
    
 0.807
cycY
Cytochrome c biogenesis protein CycY.
    
 0.807
dsbE
Cytochrome c biogenesis protein CcmG.
    
 0.807
tlpA
Cytochrome c biogenesis protein TlpA.
    
 0.807
garB
Glutathione amide reductase; Maintains high levels of reduced glutathione.
 
  
 0.739
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
     
 0.673
nagL_2
Maleylpyruvate isomerase; Belongs to the GST superfamily.
  
 
  0.669
gstB_2
Glutathione S-transferase GST-6.0.
   
 
  0.653
yibF
Putative GST-like protein YibF.
   
 
  0.653
Your Current Organism:
Shimia marina
NCBI taxonomy Id: 321267
Other names: CECT 7688, DSM 26895, JCM 13038, KCCM 42117, Rhodobacteraceae bacterium CL-TA03, S. marina, Shimia marina Choi and Cho 2006, strain CL-TA03
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