Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH51228.1 | CUH51229.1 | SHM7688_00662 | SHM7688_00663 | ABC-type uncharacterized transport system, auxiliary component. | Virulence factor Mce family protein. | 0.983 |
CUH51228.1 | CUH51230.1 | SHM7688_00662 | SHM7688_00664 | ABC-type uncharacterized transport system, auxiliary component. | Putative ABC transporter ATP-binding protein. | 0.975 |
CUH51228.1 | CUH51232.1 | SHM7688_00662 | SHM7688_00666 | ABC-type uncharacterized transport system, auxiliary component. | Phenylacetic acid degradation operon negative regulatory protein PaaX. | 0.499 |
CUH51228.1 | mlaE_2 | SHM7688_00662 | SHM7688_00665 | ABC-type uncharacterized transport system, auxiliary component. | Putative phospholipid ABC transporter permease protein MlaE. | 0.976 |
CUH51229.1 | CUH51228.1 | SHM7688_00663 | SHM7688_00662 | Virulence factor Mce family protein. | ABC-type uncharacterized transport system, auxiliary component. | 0.983 |
CUH51229.1 | CUH51230.1 | SHM7688_00663 | SHM7688_00664 | Virulence factor Mce family protein. | Putative ABC transporter ATP-binding protein. | 0.998 |
CUH51229.1 | CUH51232.1 | SHM7688_00663 | SHM7688_00666 | Virulence factor Mce family protein. | Phenylacetic acid degradation operon negative regulatory protein PaaX. | 0.499 |
CUH51229.1 | mlaE_2 | SHM7688_00663 | SHM7688_00665 | Virulence factor Mce family protein. | Putative phospholipid ABC transporter permease protein MlaE. | 0.999 |
CUH51230.1 | CUH51228.1 | SHM7688_00664 | SHM7688_00662 | Putative ABC transporter ATP-binding protein. | ABC-type uncharacterized transport system, auxiliary component. | 0.975 |
CUH51230.1 | CUH51229.1 | SHM7688_00664 | SHM7688_00663 | Putative ABC transporter ATP-binding protein. | Virulence factor Mce family protein. | 0.998 |
CUH51230.1 | CUH51232.1 | SHM7688_00664 | SHM7688_00666 | Putative ABC transporter ATP-binding protein. | Phenylacetic acid degradation operon negative regulatory protein PaaX. | 0.499 |
CUH51230.1 | mlaE_2 | SHM7688_00664 | SHM7688_00665 | Putative ABC transporter ATP-binding protein. | Putative phospholipid ABC transporter permease protein MlaE. | 0.999 |
CUH51232.1 | CUH51228.1 | SHM7688_00666 | SHM7688_00662 | Phenylacetic acid degradation operon negative regulatory protein PaaX. | ABC-type uncharacterized transport system, auxiliary component. | 0.499 |
CUH51232.1 | CUH51229.1 | SHM7688_00666 | SHM7688_00663 | Phenylacetic acid degradation operon negative regulatory protein PaaX. | Virulence factor Mce family protein. | 0.499 |
CUH51232.1 | CUH51230.1 | SHM7688_00666 | SHM7688_00664 | Phenylacetic acid degradation operon negative regulatory protein PaaX. | Putative ABC transporter ATP-binding protein. | 0.499 |
CUH51232.1 | CUH51233.1 | SHM7688_00666 | SHM7688_00667 | Phenylacetic acid degradation operon negative regulatory protein PaaX. | Putative Actinobacterial protein. | 0.501 |
CUH51232.1 | CUH51234.1 | SHM7688_00666 | SHM7688_00668 | Phenylacetic acid degradation operon negative regulatory protein PaaX. | Sulfite exporter TauE/SafE. | 0.424 |
CUH51232.1 | CUH52462.1 | SHM7688_00666 | SHM7688_01908 | Phenylacetic acid degradation operon negative regulatory protein PaaX. | Hypothetical protein. | 0.613 |
CUH51232.1 | CUH54378.1 | SHM7688_00666 | SHM7688_03848 | Phenylacetic acid degradation operon negative regulatory protein PaaX. | Putative enzyme related to lactoylglutathione lyase. | 0.451 |
CUH51232.1 | cobB_2 | SHM7688_00666 | SHM7688_03667 | Phenylacetic acid degradation operon negative regulatory protein PaaX. | NAD-dependent protein deacylase; Belongs to the sirtuin family. Class III subfamily. | 0.609 |
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