STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH51232.1Phenylacetic acid degradation operon negative regulatory protein PaaX. (263 aa)    
Predicted Functional Partners:
CUH52462.1
Hypothetical protein.
  
     0.613
cobB_2
NAD-dependent protein deacylase; Belongs to the sirtuin family. Class III subfamily.
   
    0.609
mhpA
3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase.
  
     0.603
CUH51233.1
Putative Actinobacterial protein.
       0.501
CUH51228.1
ABC-type uncharacterized transport system, auxiliary component.
       0.499
CUH51229.1
Virulence factor Mce family protein.
       0.499
CUH51230.1
Putative ABC transporter ATP-binding protein.
       0.499
mlaE_2
Putative phospholipid ABC transporter permease protein MlaE.
       0.499
CUH54378.1
Putative enzyme related to lactoylglutathione lyase.
   
    0.451
CUH51234.1
Sulfite exporter TauE/SafE.
       0.424
Your Current Organism:
Shimia marina
NCBI taxonomy Id: 321267
Other names: CECT 7688, DSM 26895, JCM 13038, KCCM 42117, Rhodobacteraceae bacterium CL-TA03, S. marina, Shimia marina Choi and Cho 2006, strain CL-TA03
Server load: low (24%) [HD]