STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH51298.1Fatty acid hydroxylase superfamily protein. (331 aa)    
Predicted Functional Partners:
CUH53401.1
Squalene synthase HpnD.
  
 0.792
CUH51182.1
Hypothetical protein; N-terminal double-transmembrane domain.
   
 0.767
CUH51297.1
Aldolase II superfamily protein.
       0.664
cprA
3-chloro-4-hydroxyphenylacetate reductive dehalogenase precursor.
  
 
  0.653
cypE
Putative bifunctional P-450/NADPH-P450 reductase 2; Belongs to the cytochrome P450 family.
  
 0.529
pksG
Polyketide biosynthesis 3-hydroxy-3-methylglutaryl-ACP synthase PksG.
   
 
 0.526
ptlI
Pentalenene oxygenase.
  
 0.522
exoI
Succinoglycan biosynthesis protein ExoI.
   
    0.508
ubiH
2-octaprenyl-6-methoxyphenol hydroxylase.
   
 0.489
mhpA
3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase.
   
 0.489
Your Current Organism:
Shimia marina
NCBI taxonomy Id: 321267
Other names: CECT 7688, DSM 26895, JCM 13038, KCCM 42117, Rhodobacteraceae bacterium CL-TA03, S. marina, Shimia marina Choi and Cho 2006, strain CL-TA03
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