Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUH50965.1 | manX | SHM7688_00397 | SHM7688_00396 | glmZ(sRNA)-inactivating NTPase; Displays ATPase and GTPase activities. | EIIAB-Man. | 0.888 |
| CUH50965.1 | ptsN | SHM7688_00397 | SHM7688_01017 | glmZ(sRNA)-inactivating NTPase; Displays ATPase and GTPase activities. | Nitrogen regulatory protein. | 0.839 |
| CUH50965.1 | ptsO | SHM7688_00397 | SHM7688_00395 | glmZ(sRNA)-inactivating NTPase; Displays ATPase and GTPase activities. | Phosphocarrier protein NPr. | 0.895 |
| CUH50965.1 | yvyD | SHM7688_00397 | SHM7688_01018 | glmZ(sRNA)-inactivating NTPase; Displays ATPase and GTPase activities. | SigL modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.550 |
| CUH51583.1 | CUH51584.1 | SHM7688_01020 | SHM7688_01021 | LPS assembly outer membrane complex protein LptD. | Hypothetical protein. | 0.901 |
| CUH51583.1 | lptB_1 | SHM7688_01020 | SHM7688_01019 | LPS assembly outer membrane complex protein LptD. | Lipopolysaccharide export system ATP-binding protein LptB. | 0.982 |
| CUH51583.1 | ptsN | SHM7688_01020 | SHM7688_01017 | LPS assembly outer membrane complex protein LptD. | Nitrogen regulatory protein. | 0.657 |
| CUH51583.1 | rnd_1 | SHM7688_01020 | SHM7688_01023 | LPS assembly outer membrane complex protein LptD. | Ribonuclease D. | 0.767 |
| CUH51583.1 | yvyD | SHM7688_01020 | SHM7688_01018 | LPS assembly outer membrane complex protein LptD. | SigL modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.724 |
| CUH51584.1 | CUH51583.1 | SHM7688_01021 | SHM7688_01020 | Hypothetical protein. | LPS assembly outer membrane complex protein LptD. | 0.901 |
| CUH51584.1 | lptB_1 | SHM7688_01021 | SHM7688_01019 | Hypothetical protein. | Lipopolysaccharide export system ATP-binding protein LptB. | 0.854 |
| CUH51584.1 | ptsN | SHM7688_01021 | SHM7688_01017 | Hypothetical protein. | Nitrogen regulatory protein. | 0.603 |
| CUH51584.1 | rnd_1 | SHM7688_01021 | SHM7688_01023 | Hypothetical protein. | Ribonuclease D. | 0.767 |
| CUH51584.1 | yvyD | SHM7688_01021 | SHM7688_01018 | Hypothetical protein. | SigL modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.645 |
| lptB_1 | CUH51583.1 | SHM7688_01019 | SHM7688_01020 | Lipopolysaccharide export system ATP-binding protein LptB. | LPS assembly outer membrane complex protein LptD. | 0.982 |
| lptB_1 | CUH51584.1 | SHM7688_01019 | SHM7688_01021 | Lipopolysaccharide export system ATP-binding protein LptB. | Hypothetical protein. | 0.854 |
| lptB_1 | ptsN | SHM7688_01019 | SHM7688_01017 | Lipopolysaccharide export system ATP-binding protein LptB. | Nitrogen regulatory protein. | 0.634 |
| lptB_1 | rnd_1 | SHM7688_01019 | SHM7688_01023 | Lipopolysaccharide export system ATP-binding protein LptB. | Ribonuclease D. | 0.767 |
| lptB_1 | yvyD | SHM7688_01019 | SHM7688_01018 | Lipopolysaccharide export system ATP-binding protein LptB. | SigL modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.707 |
| mak | manX | SHM7688_00857 | SHM7688_00396 | Fructokinase. | EIIAB-Man. | 0.798 |
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