STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH51753.1Protein-disulfide isomerase. (260 aa)    
Predicted Functional Partners:
dsbD_2
Thiol:disulfide interchange protein DsbD precursor.
 
 
 0.844
CUH51748.1
Disulfide bond formation protein B.
 
   0.612
CUH51754.1
Molybdopterin biosynthesis-like protein MoeZ.
  
    0.595
bdbD_4
Thiol-disulfide oxidoreductase D.
  
     0.576
cusB
Cation efflux system protein CusB precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.557
CUH51752.1
Hypothetical protein.
       0.532
dsbD_1
Thiol:disulfide interchange protein DsbD precursor.
  
 
 0.490
CUH52802.1
Outer membrane protein W.
  
   
 0.489
CUH52712.1
Transposase.
  
     0.475
CUH51711.1
Disulfide bond formation protein B.
  
   0.411
Your Current Organism:
Shimia marina
NCBI taxonomy Id: 321267
Other names: CECT 7688, DSM 26895, JCM 13038, KCCM 42117, Rhodobacteraceae bacterium CL-TA03, S. marina, Shimia marina Choi and Cho 2006, strain CL-TA03
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.