STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH51979.1Alkanesulfonate transporter substrate-binding subunit. (361 aa)    
Predicted Functional Partners:
cmpC_1
Bicarbonate transport ATP-binding protein CmpC.
 
 
 0.967
ssuC_2
Putative aliphatic sulfonates transport permease protein SsuC.
 
 
  0.951
pah_1
Proclavaminate amidinohydrolase; Belongs to the arginase family.
 
     0.731
rpfC_1
Sensory/regulatory protein RpfC.
    
 0.722
cmpB
Bicarbonate transport system permease protein CmpB.
 
 
  0.660
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
    
 0.628
arcB_2
Aerobic respiration control sensor protein ArcB.
    
  0.582
ssuB
Aliphatic sulfonates import ATP-binding protein SsuB.
  
 
 0.569
tauB_1
Taurine import ATP-binding protein TauB; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
  
 
 0.569
tauB_2
Taurine import ATP-binding protein TauB.
  
 
 0.569
Your Current Organism:
Shimia marina
NCBI taxonomy Id: 321267
Other names: CECT 7688, DSM 26895, JCM 13038, KCCM 42117, Rhodobacteraceae bacterium CL-TA03, S. marina, Shimia marina Choi and Cho 2006, strain CL-TA03
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