Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH50725.1 | potA_3 | SHM7688_00154 | SHM7688_00816 | Hypothetical protein. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.732 |
CUH50725.1 | potA_5 | SHM7688_00154 | SHM7688_01528 | Hypothetical protein. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.732 |
CUH50725.1 | potB_1 | SHM7688_00154 | SHM7688_00822 | Hypothetical protein. | Spermidine/putrescine transport system permease protein PotB. | 0.799 |
CUH50725.1 | potB_2 | SHM7688_00154 | SHM7688_01527 | Hypothetical protein. | Spermidine/putrescine transport system permease protein PotB. | 0.799 |
CUH50725.1 | potH_2 | SHM7688_00154 | SHM7688_00155 | Hypothetical protein. | Putrescine transport system permease protein PotH. | 0.973 |
CUH50725.1 | potH_3 | SHM7688_00154 | SHM7688_00815 | Hypothetical protein. | Putrescine transport system permease protein PotH. | 0.799 |
CUH50725.1 | ydcV_4 | SHM7688_00154 | SHM7688_01526 | Hypothetical protein. | Inner membrane ABC transporter permease protein YdcV. | 0.821 |
potA_3 | CUH50725.1 | SHM7688_00816 | SHM7688_00154 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Hypothetical protein. | 0.732 |
potA_3 | potA_5 | SHM7688_00816 | SHM7688_01528 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.404 |
potA_3 | potB_1 | SHM7688_00816 | SHM7688_00822 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Spermidine/putrescine transport system permease protein PotB. | 0.826 |
potA_3 | potB_2 | SHM7688_00816 | SHM7688_01527 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Spermidine/putrescine transport system permease protein PotB. | 0.912 |
potA_3 | potD | SHM7688_00816 | SHM7688_01525 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Spermidine/putrescine-binding periplasmic protein precursor; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. | 0.883 |
potA_3 | potF_1 | SHM7688_00816 | SHM7688_00572 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Putrescine-binding periplasmic protein precursor. | 0.913 |
potA_3 | potF_2 | SHM7688_00816 | SHM7688_00817 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Putrescine-binding periplasmic protein precursor; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. | 0.963 |
potA_3 | potH_2 | SHM7688_00816 | SHM7688_00155 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Putrescine transport system permease protein PotH. | 0.785 |
potA_3 | potH_3 | SHM7688_00816 | SHM7688_00815 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Putrescine transport system permease protein PotH. | 0.983 |
potA_3 | ydcV_4 | SHM7688_00816 | SHM7688_01526 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Inner membrane ABC transporter permease protein YdcV. | 0.908 |
potA_5 | CUH50725.1 | SHM7688_01528 | SHM7688_00154 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | Hypothetical protein. | 0.732 |
potA_5 | potA_3 | SHM7688_01528 | SHM7688_00816 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.404 |
potA_5 | potB_1 | SHM7688_01528 | SHM7688_00822 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | Spermidine/putrescine transport system permease protein PotB. | 0.806 |
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