STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH52132.1Capsule polysaccharide biosynthesis protein. (651 aa)    
Predicted Functional Partners:
CUH52131.1
Vi polysaccharide export inner membrane protein VexD.
 
  
 0.981
kpsM_2
Polysialic acid transport protein KpsM.
 
  
 0.978
kpsT_2
Polysialic acid transport ATP-binding protein KpsT.
 
  
 0.977
CUH52138.1
Polysaccharide export protein Wza.
 
  
 0.967
CUH52139.1
Capsule polysaccharide biosynthesis protein.
   
 0.952
kpsT_3
Polysialic acid transport ATP-binding protein KpsT.
 
  
 0.922
kpsM_1
Polysialic acid transport protein KpsM.
 
  
 0.916
CUH51504.1
Vi polysaccharide export inner membrane protein VexD.
 
  
 0.916
CUH54345.1
Vi polysaccharide export inner membrane protein VexD.
 
  
 0.912
kdsD_2
Arabinose 5-phosphate isomerase KdsD; Belongs to the SIS family. GutQ/KpsF subfamily.
     
 0.865
Your Current Organism:
Shimia marina
NCBI taxonomy Id: 321267
Other names: CECT 7688, DSM 26895, JCM 13038, KCCM 42117, Rhodobacteraceae bacterium CL-TA03, S. marina, Shimia marina Choi and Cho 2006, strain CL-TA03
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