Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH52165.1 | CUH52287.1 | SHM7688_01607 | SHM7688_01733 | Cell division protein FtsN. | Type IV pilus biogenesis/stability protein PilW. | 0.740 |
CUH52165.1 | CUH52288.1 | SHM7688_01607 | SHM7688_01734 | Cell division protein FtsN. | Type IV pilus biogenesis/stability protein PilW. | 0.738 |
CUH52165.1 | CUH52289.1 | SHM7688_01607 | SHM7688_01735 | Cell division protein FtsN. | Flp pilus assembly protein, protease CpaA. | 0.726 |
CUH52165.1 | CUH53126.1 | SHM7688_01607 | SHM7688_02578 | Cell division protein FtsN. | Hypothetical protein. | 0.765 |
CUH52165.1 | CUH53238.1 | SHM7688_01607 | SHM7688_02691 | Cell division protein FtsN. | Hypothetical protein. | 0.745 |
CUH52165.1 | CUH53239.1 | SHM7688_01607 | SHM7688_02692 | Cell division protein FtsN. | Hypothetical protein. | 0.752 |
CUH52165.1 | CUH53567.1 | SHM7688_01607 | SHM7688_03021 | Cell division protein FtsN. | Hypothetical protein. | 0.760 |
CUH52165.1 | CUH54251.1 | SHM7688_01607 | SHM7688_03721 | Cell division protein FtsN. | Hypothetical protein. | 0.735 |
CUH52165.1 | dacD | SHM7688_01607 | SHM7688_01608 | Cell division protein FtsN. | D-alanyl-D-alanine carboxypeptidase DacD precursor; Belongs to the peptidase S11 family. | 0.836 |
CUH52165.1 | tmk | SHM7688_01607 | SHM7688_01609 | Cell division protein FtsN. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.836 |
CUH52287.1 | CUH52165.1 | SHM7688_01733 | SHM7688_01607 | Type IV pilus biogenesis/stability protein PilW. | Cell division protein FtsN. | 0.740 |
CUH52287.1 | CUH52288.1 | SHM7688_01733 | SHM7688_01734 | Type IV pilus biogenesis/stability protein PilW. | Type IV pilus biogenesis/stability protein PilW. | 0.952 |
CUH52287.1 | CUH52289.1 | SHM7688_01733 | SHM7688_01735 | Type IV pilus biogenesis/stability protein PilW. | Flp pilus assembly protein, protease CpaA. | 0.944 |
CUH52287.1 | CUH53126.1 | SHM7688_01733 | SHM7688_02578 | Type IV pilus biogenesis/stability protein PilW. | Hypothetical protein. | 0.621 |
CUH52287.1 | CUH53238.1 | SHM7688_01733 | SHM7688_02691 | Type IV pilus biogenesis/stability protein PilW. | Hypothetical protein. | 0.711 |
CUH52287.1 | CUH53239.1 | SHM7688_01733 | SHM7688_02692 | Type IV pilus biogenesis/stability protein PilW. | Hypothetical protein. | 0.743 |
CUH52287.1 | CUH53567.1 | SHM7688_01733 | SHM7688_03021 | Type IV pilus biogenesis/stability protein PilW. | Hypothetical protein. | 0.530 |
CUH52287.1 | CUH54251.1 | SHM7688_01733 | SHM7688_03721 | Type IV pilus biogenesis/stability protein PilW. | Hypothetical protein. | 0.691 |
CUH52288.1 | CUH52165.1 | SHM7688_01734 | SHM7688_01607 | Type IV pilus biogenesis/stability protein PilW. | Cell division protein FtsN. | 0.738 |
CUH52288.1 | CUH52287.1 | SHM7688_01734 | SHM7688_01733 | Type IV pilus biogenesis/stability protein PilW. | Type IV pilus biogenesis/stability protein PilW. | 0.952 |
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