Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH52295.1 | CUH52297.1 | SHM7688_01741 | SHM7688_01743 | Putative Fe-S protein. | Hypothetical protein. | 0.773 |
CUH52295.1 | CUH52298.1 | SHM7688_01741 | SHM7688_01744 | Putative Fe-S protein. | Putative iron-regulated membrane protein. | 0.561 |
CUH52295.1 | engB | SHM7688_01741 | SHM7688_01742 | Putative Fe-S protein. | Putative GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.868 |
CUH52295.1 | gmr_1 | SHM7688_01741 | SHM7688_01739 | Putative Fe-S protein. | Cyclic di-GMP phosphodiesterase Gmr. | 0.587 |
CUH52295.1 | mmsB_1 | SHM7688_01741 | SHM7688_01745 | Putative Fe-S protein. | 3-hydroxyisobutyrate dehydrogenase. | 0.476 |
CUH52295.1 | pcs | SHM7688_01741 | SHM7688_01746 | Putative Fe-S protein. | Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.453 |
CUH52295.1 | yidC | SHM7688_01741 | SHM7688_01740 | Putative Fe-S protein. | Oxa1Ec; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.875 |
CUH52297.1 | CUH52295.1 | SHM7688_01743 | SHM7688_01741 | Hypothetical protein. | Putative Fe-S protein. | 0.773 |
CUH52297.1 | CUH52298.1 | SHM7688_01743 | SHM7688_01744 | Hypothetical protein. | Putative iron-regulated membrane protein. | 0.561 |
CUH52297.1 | engB | SHM7688_01743 | SHM7688_01742 | Hypothetical protein. | Putative GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.773 |
CUH52297.1 | gmr_1 | SHM7688_01743 | SHM7688_01739 | Hypothetical protein. | Cyclic di-GMP phosphodiesterase Gmr. | 0.467 |
CUH52297.1 | mmsB_1 | SHM7688_01743 | SHM7688_01745 | Hypothetical protein. | 3-hydroxyisobutyrate dehydrogenase. | 0.476 |
CUH52297.1 | pcs | SHM7688_01743 | SHM7688_01746 | Hypothetical protein. | Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.453 |
CUH52297.1 | yidC | SHM7688_01743 | SHM7688_01740 | Hypothetical protein. | Oxa1Ec; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.773 |
CUH52298.1 | CUH52295.1 | SHM7688_01744 | SHM7688_01741 | Putative iron-regulated membrane protein. | Putative Fe-S protein. | 0.561 |
CUH52298.1 | CUH52297.1 | SHM7688_01744 | SHM7688_01743 | Putative iron-regulated membrane protein. | Hypothetical protein. | 0.561 |
CUH52298.1 | engB | SHM7688_01744 | SHM7688_01742 | Putative iron-regulated membrane protein. | Putative GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.561 |
CUH52298.1 | mmsB_1 | SHM7688_01744 | SHM7688_01745 | Putative iron-regulated membrane protein. | 3-hydroxyisobutyrate dehydrogenase. | 0.645 |
CUH52298.1 | pcs | SHM7688_01744 | SHM7688_01746 | Putative iron-regulated membrane protein. | Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.612 |
CUH52298.1 | yidC | SHM7688_01744 | SHM7688_01740 | Putative iron-regulated membrane protein. | Oxa1Ec; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.561 |
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