Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH51691.1 | CUH52694.1 | SHM7688_01130 | SHM7688_02141 | Type IV secretion system T-DNA border endonuclease VirD2. | Bacterial mobilisation protein (MobC). | 0.779 |
CUH51691.1 | ptlG_1 | SHM7688_01130 | SHM7688_01123 | Type IV secretion system T-DNA border endonuclease VirD2. | Pertussis toxin liberation protein G. | 0.776 |
CUH51691.1 | ptlG_2 | SHM7688_01130 | SHM7688_01275 | Type IV secretion system T-DNA border endonuclease VirD2. | Pertussis toxin liberation protein G. | 0.434 |
CUH51691.1 | ptlG_3 | SHM7688_01130 | SHM7688_02130 | Type IV secretion system T-DNA border endonuclease VirD2. | Pertussis toxin liberation protein G. | 0.770 |
CUH51691.1 | traG_4 | SHM7688_01130 | SHM7688_02139 | Type IV secretion system T-DNA border endonuclease VirD2. | Conjugal transfer protein TraG. | 0.803 |
CUH51691.1 | virB4_1 | SHM7688_01130 | SHM7688_01117 | Type IV secretion system T-DNA border endonuclease VirD2. | Type IV secretion system protein virB4. | 0.786 |
CUH51691.1 | virB4_2 | SHM7688_01130 | SHM7688_01281 | Type IV secretion system T-DNA border endonuclease VirD2. | Type IV secretion system protein virB4. | 0.675 |
CUH51691.1 | virB4_3 | SHM7688_01130 | SHM7688_02124 | Type IV secretion system T-DNA border endonuclease VirD2. | Type IV secretion system protein virB4. | 0.783 |
CUH51691.1 | virB9_1 | SHM7688_01130 | SHM7688_01122 | Type IV secretion system T-DNA border endonuclease VirD2. | Type IV secretion system protein virB9 precursor. | 0.729 |
CUH52693.1 | CUH52694.1 | SHM7688_02140 | SHM7688_02141 | Type IV secretion system T-DNA border endonuclease VirD2. | Bacterial mobilisation protein (MobC). | 0.948 |
CUH52693.1 | ptlG_1 | SHM7688_02140 | SHM7688_01123 | Type IV secretion system T-DNA border endonuclease VirD2. | Pertussis toxin liberation protein G. | 0.775 |
CUH52693.1 | ptlG_2 | SHM7688_02140 | SHM7688_01275 | Type IV secretion system T-DNA border endonuclease VirD2. | Pertussis toxin liberation protein G. | 0.518 |
CUH52693.1 | ptlG_3 | SHM7688_02140 | SHM7688_02130 | Type IV secretion system T-DNA border endonuclease VirD2. | Pertussis toxin liberation protein G. | 0.773 |
CUH52693.1 | traG_4 | SHM7688_02140 | SHM7688_02139 | Type IV secretion system T-DNA border endonuclease VirD2. | Conjugal transfer protein TraG. | 0.953 |
CUH52693.1 | virB4_1 | SHM7688_02140 | SHM7688_01117 | Type IV secretion system T-DNA border endonuclease VirD2. | Type IV secretion system protein virB4. | 0.787 |
CUH52693.1 | virB4_2 | SHM7688_02140 | SHM7688_01281 | Type IV secretion system T-DNA border endonuclease VirD2. | Type IV secretion system protein virB4. | 0.716 |
CUH52693.1 | virB4_3 | SHM7688_02140 | SHM7688_02124 | Type IV secretion system T-DNA border endonuclease VirD2. | Type IV secretion system protein virB4. | 0.785 |
CUH52693.1 | virB9_1 | SHM7688_02140 | SHM7688_01122 | Type IV secretion system T-DNA border endonuclease VirD2. | Type IV secretion system protein virB9 precursor. | 0.742 |
CUH52694.1 | CUH51691.1 | SHM7688_02141 | SHM7688_01130 | Bacterial mobilisation protein (MobC). | Type IV secretion system T-DNA border endonuclease VirD2. | 0.779 |
CUH52694.1 | CUH52693.1 | SHM7688_02141 | SHM7688_02140 | Bacterial mobilisation protein (MobC). | Type IV secretion system T-DNA border endonuclease VirD2. | 0.948 |
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