Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH53710.1 | coxM | SHM7688_03169 | SHM7688_00022 | Molybdopterin-guanine dinucleotide biosynthesis protein MobA. | Carbon monoxide dehydrogenase medium chain. | 0.735 |
CUH53710.1 | cutL_1 | SHM7688_03169 | SHM7688_00023 | Molybdopterin-guanine dinucleotide biosynthesis protein MobA. | Carbon monoxide dehydrogenase large chain. | 0.708 |
CUH53710.1 | cutL_2 | SHM7688_03169 | SHM7688_01958 | Molybdopterin-guanine dinucleotide biosynthesis protein MobA. | Carbon monoxide dehydrogenase large chain. | 0.724 |
CUH53710.1 | iorA_2 | SHM7688_03169 | SHM7688_02618 | Molybdopterin-guanine dinucleotide biosynthesis protein MobA. | Isoquinoline 1-oxidoreductase subunit alpha. | 0.827 |
CUH53710.1 | iorB_1 | SHM7688_03169 | SHM7688_00212 | Molybdopterin-guanine dinucleotide biosynthesis protein MobA. | Isoquinoline 1-oxidoreductase subunit beta. | 0.729 |
CUH53710.1 | iorB_2 | SHM7688_03169 | SHM7688_02619 | Molybdopterin-guanine dinucleotide biosynthesis protein MobA. | Isoquinoline 1-oxidoreductase subunit beta. | 0.688 |
CUH53710.1 | mop_2 | SHM7688_03169 | SHM7688_03059 | Molybdopterin-guanine dinucleotide biosynthesis protein MobA. | Aldehyde oxidoreductase. | 0.896 |
CUH53710.1 | ndhF | SHM7688_03169 | SHM7688_03058 | Molybdopterin-guanine dinucleotide biosynthesis protein MobA. | Nicotinate dehydrogenase FAD-subunit. | 0.590 |
CUH53710.1 | pucA | SHM7688_03169 | SHM7688_00026 | Molybdopterin-guanine dinucleotide biosynthesis protein MobA. | Putative xanthine dehydrogenase subunit A. | 0.931 |
coxM | CUH53710.1 | SHM7688_00022 | SHM7688_03169 | Carbon monoxide dehydrogenase medium chain. | Molybdopterin-guanine dinucleotide biosynthesis protein MobA. | 0.735 |
coxM | cutL_1 | SHM7688_00022 | SHM7688_00023 | Carbon monoxide dehydrogenase medium chain. | Carbon monoxide dehydrogenase large chain. | 0.999 |
coxM | cutL_2 | SHM7688_00022 | SHM7688_01958 | Carbon monoxide dehydrogenase medium chain. | Carbon monoxide dehydrogenase large chain. | 0.996 |
coxM | iorA_2 | SHM7688_00022 | SHM7688_02618 | Carbon monoxide dehydrogenase medium chain. | Isoquinoline 1-oxidoreductase subunit alpha. | 0.947 |
coxM | iorB_1 | SHM7688_00022 | SHM7688_00212 | Carbon monoxide dehydrogenase medium chain. | Isoquinoline 1-oxidoreductase subunit beta. | 0.868 |
coxM | iorB_2 | SHM7688_00022 | SHM7688_02619 | Carbon monoxide dehydrogenase medium chain. | Isoquinoline 1-oxidoreductase subunit beta. | 0.868 |
coxM | mop_2 | SHM7688_00022 | SHM7688_03059 | Carbon monoxide dehydrogenase medium chain. | Aldehyde oxidoreductase. | 0.998 |
coxM | ndhF | SHM7688_00022 | SHM7688_03058 | Carbon monoxide dehydrogenase medium chain. | Nicotinate dehydrogenase FAD-subunit. | 0.502 |
coxM | pucA | SHM7688_00022 | SHM7688_00026 | Carbon monoxide dehydrogenase medium chain. | Putative xanthine dehydrogenase subunit A. | 0.905 |
cutL_1 | CUH53710.1 | SHM7688_00023 | SHM7688_03169 | Carbon monoxide dehydrogenase large chain. | Molybdopterin-guanine dinucleotide biosynthesis protein MobA. | 0.708 |
cutL_1 | coxM | SHM7688_00023 | SHM7688_00022 | Carbon monoxide dehydrogenase large chain. | Carbon monoxide dehydrogenase medium chain. | 0.999 |
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