Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH50686.1 | CUH51026.1 | SHM7688_00113 | SHM7688_00459 | Hypothetical protein. | Putative small protein. | 0.537 |
CUH50686.1 | CUH53481.1 | SHM7688_00113 | SHM7688_02935 | Hypothetical protein. | Putative acyltransferase. | 0.584 |
CUH50686.1 | CUH53730.1 | SHM7688_00113 | SHM7688_03190 | Hypothetical protein. | Hypothetical protein. | 0.650 |
CUH50686.1 | CUH54044.1 | SHM7688_00113 | SHM7688_03513 | Hypothetical protein. | Hypothetical protein. | 0.706 |
CUH50686.1 | mreC | SHM7688_00113 | SHM7688_03828 | Hypothetical protein. | Rod shape-determining protein MreC. | 0.736 |
CUH51026.1 | CUH50686.1 | SHM7688_00459 | SHM7688_00113 | Putative small protein. | Hypothetical protein. | 0.537 |
CUH51026.1 | CUH53481.1 | SHM7688_00459 | SHM7688_02935 | Putative small protein. | Putative acyltransferase. | 0.526 |
CUH51026.1 | CUH53730.1 | SHM7688_00459 | SHM7688_03190 | Putative small protein. | Hypothetical protein. | 0.769 |
CUH51026.1 | CUH54044.1 | SHM7688_00459 | SHM7688_03513 | Putative small protein. | Hypothetical protein. | 0.773 |
CUH51228.1 | CUH53481.1 | SHM7688_00662 | SHM7688_02935 | ABC-type uncharacterized transport system, auxiliary component. | Putative acyltransferase. | 0.574 |
CUH53481.1 | CUH50686.1 | SHM7688_02935 | SHM7688_00113 | Putative acyltransferase. | Hypothetical protein. | 0.584 |
CUH53481.1 | CUH51026.1 | SHM7688_02935 | SHM7688_00459 | Putative acyltransferase. | Putative small protein. | 0.526 |
CUH53481.1 | CUH51228.1 | SHM7688_02935 | SHM7688_00662 | Putative acyltransferase. | ABC-type uncharacterized transport system, auxiliary component. | 0.574 |
CUH53481.1 | CUH53482.1 | SHM7688_02935 | SHM7688_02936 | Putative acyltransferase. | Glycyl-glycine endopeptidase ALE-1 precursor. | 0.878 |
CUH53481.1 | CUH53483.1 | SHM7688_02935 | SHM7688_02937 | Putative acyltransferase. | Hypothetical protein. | 0.644 |
CUH53481.1 | CUH53730.1 | SHM7688_02935 | SHM7688_03190 | Putative acyltransferase. | Hypothetical protein. | 0.520 |
CUH53481.1 | CUH54044.1 | SHM7688_02935 | SHM7688_03513 | Putative acyltransferase. | Hypothetical protein. | 0.575 |
CUH53481.1 | bcp_2 | SHM7688_02935 | SHM7688_02938 | Putative acyltransferase. | Putative peroxiredoxin bcp. | 0.672 |
CUH53481.1 | mreC | SHM7688_02935 | SHM7688_03828 | Putative acyltransferase. | Rod shape-determining protein MreC. | 0.515 |
CUH53481.1 | trpD | SHM7688_02935 | SHM7688_02995 | Putative acyltransferase. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.562 |
page 1 of 3