Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH51674.1 | mprF | SHM7688_01113 | SHM7688_03033 | Hypothetical protein. | Phosphatidylglycerol lysyltransferase. | 0.422 |
CUH52672.1 | mprF | SHM7688_02119 | SHM7688_03033 | Hypothetical protein. | Phosphatidylglycerol lysyltransferase. | 0.448 |
CUH53580.1 | mprF | SHM7688_03034 | SHM7688_03033 | Hypothetical protein. | Phosphatidylglycerol lysyltransferase. | 0.564 |
CUH53580.1 | yitJ | SHM7688_03034 | SHM7688_03032 | Hypothetical protein. | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase. | 0.564 |
dhbF | mprF | SHM7688_00556 | SHM7688_03033 | Dimodular nonribosomal peptide synthase. | Phosphatidylglycerol lysyltransferase. | 0.509 |
dhbF | yitJ | SHM7688_00556 | SHM7688_03032 | Dimodular nonribosomal peptide synthase. | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase. | 0.799 |
mprF | CUH51674.1 | SHM7688_03033 | SHM7688_01113 | Phosphatidylglycerol lysyltransferase. | Hypothetical protein. | 0.422 |
mprF | CUH52672.1 | SHM7688_03033 | SHM7688_02119 | Phosphatidylglycerol lysyltransferase. | Hypothetical protein. | 0.448 |
mprF | CUH53580.1 | SHM7688_03033 | SHM7688_03034 | Phosphatidylglycerol lysyltransferase. | Hypothetical protein. | 0.564 |
mprF | dhbF | SHM7688_03033 | SHM7688_00556 | Phosphatidylglycerol lysyltransferase. | Dimodular nonribosomal peptide synthase. | 0.509 |
mprF | yitJ | SHM7688_03033 | SHM7688_03032 | Phosphatidylglycerol lysyltransferase. | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase. | 0.667 |
yitJ | CUH53580.1 | SHM7688_03032 | SHM7688_03034 | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase. | Hypothetical protein. | 0.564 |
yitJ | dhbF | SHM7688_03032 | SHM7688_00556 | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase. | Dimodular nonribosomal peptide synthase. | 0.799 |
yitJ | mprF | SHM7688_03032 | SHM7688_03033 | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase. | Phosphatidylglycerol lysyltransferase. | 0.667 |