Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH53671.1 | CUH53747.1 | SHM7688_03127 | SHM7688_03207 | Hypothetical protein. | Blue-light-activated protein. | 0.910 |
CUH53671.1 | arcB_3 | SHM7688_03127 | SHM7688_01067 | Hypothetical protein. | Aerobic respiration control sensor protein ArcB. | 0.823 |
CUH53671.1 | arcB_4 | SHM7688_03127 | SHM7688_02932 | Hypothetical protein. | Aerobic respiration control sensor protein ArcB. | 0.844 |
CUH53671.1 | ctrA | SHM7688_03127 | SHM7688_02548 | Hypothetical protein. | Cell cycle response regulator CtrA. | 0.969 |
CUH53671.1 | luxQ_1 | SHM7688_03127 | SHM7688_00004 | Hypothetical protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.823 |
CUH53671.1 | luxQ_2 | SHM7688_03127 | SHM7688_00306 | Hypothetical protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.996 |
CUH53671.1 | luxQ_3 | SHM7688_03127 | SHM7688_00315 | Hypothetical protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.823 |
CUH53671.1 | luxQ_6 | SHM7688_03127 | SHM7688_01507 | Hypothetical protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.844 |
CUH53671.1 | luxQ_8 | SHM7688_03127 | SHM7688_02274 | Hypothetical protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.974 |
CUH53671.1 | rpfC_1 | SHM7688_03127 | SHM7688_01508 | Hypothetical protein. | Sensory/regulatory protein RpfC. | 0.986 |
CUH53747.1 | CUH53671.1 | SHM7688_03207 | SHM7688_03127 | Blue-light-activated protein. | Hypothetical protein. | 0.910 |
CUH53747.1 | arcB_3 | SHM7688_03207 | SHM7688_01067 | Blue-light-activated protein. | Aerobic respiration control sensor protein ArcB. | 0.801 |
CUH53747.1 | arcB_4 | SHM7688_03207 | SHM7688_02932 | Blue-light-activated protein. | Aerobic respiration control sensor protein ArcB. | 0.898 |
CUH53747.1 | ctrA | SHM7688_03207 | SHM7688_02548 | Blue-light-activated protein. | Cell cycle response regulator CtrA. | 0.612 |
CUH53747.1 | luxQ_1 | SHM7688_03207 | SHM7688_00004 | Blue-light-activated protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.850 |
CUH53747.1 | luxQ_2 | SHM7688_03207 | SHM7688_00306 | Blue-light-activated protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.963 |
CUH53747.1 | luxQ_3 | SHM7688_03207 | SHM7688_00315 | Blue-light-activated protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.807 |
CUH53747.1 | luxQ_6 | SHM7688_03207 | SHM7688_01507 | Blue-light-activated protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.921 |
CUH53747.1 | luxQ_8 | SHM7688_03207 | SHM7688_02274 | Blue-light-activated protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.828 |
CUH53747.1 | rpfC_1 | SHM7688_03207 | SHM7688_01508 | Blue-light-activated protein. | Sensory/regulatory protein RpfC. | 0.844 |
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