node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH52768.1 | cmdD | SHM7688_02215 | SHM7688_00554 | PAP2 superfamily protein. | Chondramide synthase cmdD. | 0.710 |
CUH52768.1 | rplF | SHM7688_02215 | SHM7688_00343 | PAP2 superfamily protein. | Hypothetical protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.839 |
CUH52768.1 | sauT | SHM7688_02215 | SHM7688_03157 | PAP2 superfamily protein. | Putative sulfoacetate--CoA ligase. | 0.774 |
cmdD | CUH52768.1 | SHM7688_00554 | SHM7688_02215 | Chondramide synthase cmdD. | PAP2 superfamily protein. | 0.710 |
cmdD | dhbF | SHM7688_00554 | SHM7688_00556 | Chondramide synthase cmdD. | Dimodular nonribosomal peptide synthase. | 0.999 |
cmdD | sauT | SHM7688_00554 | SHM7688_03157 | Chondramide synthase cmdD. | Putative sulfoacetate--CoA ligase. | 0.896 |
dhbF | cmdD | SHM7688_00556 | SHM7688_00554 | Dimodular nonribosomal peptide synthase. | Chondramide synthase cmdD. | 0.999 |
dhbF | rplC | SHM7688_00556 | SHM7688_00319 | Dimodular nonribosomal peptide synthase. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.475 |
dhbF | sauT | SHM7688_00556 | SHM7688_03157 | Dimodular nonribosomal peptide synthase. | Putative sulfoacetate--CoA ligase. | 0.876 |
nqo1_2 | sauT | SHM7688_00720 | SHM7688_03157 | NADH-quinone oxidoreductase subunit 1. | Putative sulfoacetate--CoA ligase. | 0.910 |
rplC | dhbF | SHM7688_00319 | SHM7688_00556 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Dimodular nonribosomal peptide synthase. | 0.475 |
rplC | rplF | SHM7688_00319 | SHM7688_00343 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Hypothetical protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.999 |
rplC | rplM | SHM7688_00319 | SHM7688_02560 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplC | rplO | SHM7688_00319 | SHM7688_00349 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
rplC | rplX | SHM7688_00319 | SHM7688_00339 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Hypothetical protein; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.999 |
rplC | rpsQ | SHM7688_00319 | SHM7688_00337 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.999 |
rplC | sauT | SHM7688_00319 | SHM7688_03157 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Putative sulfoacetate--CoA ligase. | 0.878 |
rplF | CUH52768.1 | SHM7688_00343 | SHM7688_02215 | Hypothetical protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | PAP2 superfamily protein. | 0.839 |
rplF | rplC | SHM7688_00343 | SHM7688_00319 | Hypothetical protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.999 |
rplF | rplM | SHM7688_00343 | SHM7688_02560 | Hypothetical protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |