Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH52653.1 | CUH53787.1 | SHM7688_02100 | SHM7688_03249 | Hypothetical protein. | Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. | 0.847 |
CUH52653.1 | cysA_1 | SHM7688_02100 | SHM7688_02088 | Hypothetical protein. | Sulfate/thiosulfate import ATP-binding protein CysA. | 0.700 |
CUH52653.1 | livF_8 | SHM7688_02100 | SHM7688_03246 | Hypothetical protein. | LIV-I protein F. | 0.583 |
CUH52653.1 | livH_3 | SHM7688_02100 | SHM7688_02086 | Hypothetical protein. | LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family. | 0.747 |
CUH52653.1 | livH_4 | SHM7688_02100 | SHM7688_02097 | Hypothetical protein. | LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family. | 0.972 |
CUH52653.1 | livH_5 | SHM7688_02100 | SHM7688_02193 | Hypothetical protein. | LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family. | 0.747 |
CUH52653.1 | livH_7 | SHM7688_02100 | SHM7688_03053 | Hypothetical protein. | LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family. | 0.747 |
CUH52653.1 | livH_8 | SHM7688_02100 | SHM7688_03248 | Hypothetical protein. | LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family. | 0.747 |
CUH52653.1 | lptB_5 | SHM7688_02100 | SHM7688_03245 | Hypothetical protein. | Lipopolysaccharide export system ATP-binding protein LptB. | 0.700 |
CUH53787.1 | CUH52653.1 | SHM7688_03249 | SHM7688_02100 | Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. | Hypothetical protein. | 0.847 |
CUH53787.1 | cysA_1 | SHM7688_03249 | SHM7688_02088 | Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. | Sulfate/thiosulfate import ATP-binding protein CysA. | 0.834 |
CUH53787.1 | livF_8 | SHM7688_03249 | SHM7688_03246 | Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. | LIV-I protein F. | 0.978 |
CUH53787.1 | livH_3 | SHM7688_03249 | SHM7688_02086 | Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. | LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family. | 0.874 |
CUH53787.1 | livH_4 | SHM7688_03249 | SHM7688_02097 | Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. | LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family. | 0.854 |
CUH53787.1 | livH_5 | SHM7688_03249 | SHM7688_02193 | Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. | LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family. | 0.871 |
CUH53787.1 | livH_7 | SHM7688_03249 | SHM7688_03053 | Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. | LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family. | 0.875 |
CUH53787.1 | livH_8 | SHM7688_03249 | SHM7688_03248 | Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. | LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family. | 0.995 |
CUH53787.1 | livK | SHM7688_03249 | SHM7688_03244 | Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. | Leucine-specific-binding protein precursor. | 0.970 |
CUH53787.1 | lptB_5 | SHM7688_03249 | SHM7688_03245 | Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. | Lipopolysaccharide export system ATP-binding protein LptB. | 0.969 |
cysA_1 | CUH52653.1 | SHM7688_02088 | SHM7688_02100 | Sulfate/thiosulfate import ATP-binding protein CysA. | Hypothetical protein. | 0.700 |
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