Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUH50686.1 | CUH53894.1 | SHM7688_00113 | SHM7688_03363 | Hypothetical protein. | rpsU-divergently transcribed protein. | 0.566 |
| CUH51060.1 | CUH52452.1 | SHM7688_00493 | SHM7688_01898 | Hypothetical protein. | ParA-like protein. | 0.589 |
| CUH51060.1 | CUH53894.1 | SHM7688_00493 | SHM7688_03363 | Hypothetical protein. | rpsU-divergently transcribed protein. | 0.658 |
| CUH52452.1 | CUH51060.1 | SHM7688_01898 | SHM7688_00493 | ParA-like protein. | Hypothetical protein. | 0.589 |
| CUH52452.1 | CUH53894.1 | SHM7688_01898 | SHM7688_03363 | ParA-like protein. | rpsU-divergently transcribed protein. | 0.613 |
| CUH53764.1 | CUH53894.1 | SHM7688_03225 | SHM7688_03363 | Thiamine-phosphate pyrophosphorylase. | rpsU-divergently transcribed protein. | 0.531 |
| CUH53894.1 | CUH50686.1 | SHM7688_03363 | SHM7688_00113 | rpsU-divergently transcribed protein. | Hypothetical protein. | 0.566 |
| CUH53894.1 | CUH51060.1 | SHM7688_03363 | SHM7688_00493 | rpsU-divergently transcribed protein. | Hypothetical protein. | 0.658 |
| CUH53894.1 | CUH52452.1 | SHM7688_03363 | SHM7688_01898 | rpsU-divergently transcribed protein. | ParA-like protein. | 0.613 |
| CUH53894.1 | CUH53764.1 | SHM7688_03363 | SHM7688_03225 | rpsU-divergently transcribed protein. | Thiamine-phosphate pyrophosphorylase. | 0.531 |
| CUH53894.1 | CUH54209.1 | SHM7688_03363 | SHM7688_03679 | rpsU-divergently transcribed protein. | Hypothetical protein; ETC complex I subunit conserved region. | 0.587 |
| CUH53894.1 | qorA_1 | SHM7688_03363 | SHM7688_03362 | rpsU-divergently transcribed protein. | Quinone oxidoreductase 1. | 0.813 |
| CUH53894.1 | rplB | SHM7688_03363 | SHM7688_00324 | rpsU-divergently transcribed protein. | Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.813 |
| CUH53894.1 | rpsU | SHM7688_03363 | SHM7688_03364 | rpsU-divergently transcribed protein. | Hypothetical protein; RRP-S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.717 |
| CUH53894.1 | ubiB | SHM7688_03363 | SHM7688_01041 | rpsU-divergently transcribed protein. | Putative ubiquinone biosynthesis protein UbiB. | 0.603 |
| CUH53894.1 | ubiH | SHM7688_03363 | SHM7688_00482 | rpsU-divergently transcribed protein. | 2-octaprenyl-6-methoxyphenol hydroxylase. | 0.550 |
| CUH54209.1 | CUH53894.1 | SHM7688_03679 | SHM7688_03363 | Hypothetical protein; ETC complex I subunit conserved region. | rpsU-divergently transcribed protein. | 0.587 |
| qorA_1 | CUH53894.1 | SHM7688_03362 | SHM7688_03363 | Quinone oxidoreductase 1. | rpsU-divergently transcribed protein. | 0.813 |
| qorA_1 | rpsU | SHM7688_03362 | SHM7688_03364 | Quinone oxidoreductase 1. | Hypothetical protein; RRP-S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.448 |
| rplB | CUH53894.1 | SHM7688_00324 | SHM7688_03363 | Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | rpsU-divergently transcribed protein. | 0.813 |
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