Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
chlPGeranylgeranyl reductase; Identified by match to protein family HMM PF01494; match to protein family HMM TIGR02023; match to protein family HMM TIGR02028; match to protein family HMM TIGR02032. (406 aa)    
Predicted Functional Partners:
chlG
Chlorophyll synthase, ChlG; Identified by match to protein family HMM PF01040; match to protein family HMM TIGR01476; match to protein family HMM TIGR02056.
 
 
 0.990
crtE
Geranylgeranyl diphosphate synthase; Identified by similarity to GB:BAA82613.1; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.
 
 0.929
CYA_1788
Prenyltransferase, UbiA family; Identified by match to protein family HMM PF01040.
 
 
 0.921
sds
Solanesyl diphosphate synthase; Identified by similarity to SP:P72580; match to protein family HMM PF00348; match to protein family HMM TIGR02749; Belongs to the FPP/GGPP synthase family.
  
 0.909
chlH
Magnesium chelatase, H subunit; Identified by match to protein family HMM PF02514; match to protein family HMM TIGR02025.
  
  
 0.907
chlM
Magnesium protoporphyrin O-methyltransferase; Identified by match to protein family HMM PF07109; match to protein family HMM TIGR02021.
  
  
 0.898
crtB
Phytoene synthase; Identified by similarity to SP:P37294; match to protein family HMM PF00494.
 
 
 0.881
acsF
Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family.
  
  
 0.879
chlL
Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
  
  
 0.847
chlN
Light-independent protochlorophyllide reductase, N subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
  
  
 0.841
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.