Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CYA_0102Conserved hypothetical protein. (72 aa)    
Predicted Functional Partners:
CYA_2234
Conserved hypothetical protein.
  
     0.640
CYA_0100
GAF/SpoIIE domain protein; Identified by match to protein family HMM PF01590; match to protein family HMM PF07228.
       0.613
CYA_0160
Conserved hypothetical protein; Identified by similarity to PIR:AB2317.
  
     0.610
CYA_0938
FHA domain protein; Identified by match to protein family HMM PF00498.
  
     0.589
CYA_0306
Conserved hypothetical protein; Identified by similarity to PIR:S36975.
  
     0.584
CYA_2089
Collagen alpha 1(III) chain.
  
     0.584
argH
Argininosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838.
       0.581
CYA_2160
CheW domain protein; Identified by match to protein family HMM PF01584.
  
     0.579
CYA_0060
Conserved hypothetical protein.
  
     0.565
CYA_0066
FHA domain protein; Identified by match to protein family HMM PF00498.
  
     0.527
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.