CYA_0125 protein (Synechococcus sp. JA33Ab) - STRING interaction network

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CYA_0125

Putative RNA-binding protein; Identified by match to protein family HMM PF00076. (83 aa)

Predicted Functional Partners:

CYA_2821

0.780

gpmI

0.574

CYA_0124

0.546

sbcD

0.519

CYA_2049

0.489

acpP

0.444

ndhK

0.421

Your Current Organism:

Synechococcus sp. JA33Ab

NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYA_0124	CYA_0125	CYA_0124	CYA_0125	Hypothetical protein; Identified by Glimmer2; putative.	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	0.546
CYA_0125	CYA_0124	CYA_0125	CYA_0124	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	Hypothetical protein; Identified by Glimmer2; putative.	0.546
CYA_0125	CYA_2049	CYA_0125	CYA_2049	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	Identified by match to protein family HMM PF00753.	0.489
CYA_0125	CYA_2821	CYA_0125	CYA_2821	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	0.780
CYA_0125	acpP	CYA_0125	CYA_2874	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.	0.444
CYA_0125	gpmI	CYA_0125	CYA_2123	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.	0.574
CYA_0125	ndhK	CYA_0125	CYA_1995	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	NADH-ubiquinone/plastoquinone oxidoreductase, K subunit; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration; Belongs to the complex I 20 kDa subunit family.	0.421
CYA_0125	sbcD	CYA_0125	CYA_0126	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	Putative nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.	0.519
CYA_2049	CYA_0125	CYA_2049	CYA_0125	Identified by match to protein family HMM PF00753.	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	0.489
CYA_2049	CYA_2821	CYA_2049	CYA_2821	Identified by match to protein family HMM PF00753.	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	0.489
CYA_2049	gpmI	CYA_2049	CYA_2123	Identified by match to protein family HMM PF00753.	2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.	0.931
CYA_2049	sbcD	CYA_2049	CYA_0126	Identified by match to protein family HMM PF00753.	Putative nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.	0.470
CYA_2821	CYA_0125	CYA_2821	CYA_0125	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	0.780
CYA_2821	CYA_2049	CYA_2821	CYA_2049	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	Identified by match to protein family HMM PF00753.	0.489
CYA_2821	acpP	CYA_2821	CYA_2874	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.	0.444
CYA_2821	gpmI	CYA_2821	CYA_2123	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.	0.574
CYA_2821	ndhK	CYA_2821	CYA_1995	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	NADH-ubiquinone/plastoquinone oxidoreductase, K subunit; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration; Belongs to the complex I 20 kDa subunit family.	0.421
acpP	CYA_0125	CYA_2874	CYA_0125	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	0.444
acpP	CYA_2821	CYA_2874	CYA_2821	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.	Putative RNA-binding protein; Identified by match to protein family HMM PF00076.	0.444
acpP	ndhK	CYA_2874	CYA_1995	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.	NADH-ubiquinone/plastoquinone oxidoreductase, K subunit; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration; Belongs to the complex I 20 kDa subunit family.	0.958

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