Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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CYA_0154Putative permease; Identified by match to protein family HMM PF02687; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (305 aa)    
Predicted Functional Partners:
ftsE
Cell division ATP-binding protein FtsE; Identified by similarity to SP:P10115; match to protein family HMM PF00005; match to protein family HMM TIGR02673.
 
 
 0.996
CYA_2882
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
   
 
 0.832
CYA_1411
S-layer domain protein; Identified by match to protein family HMM PF00395; Belongs to the OprB family.
 
 
 
 0.808
CYA_1627
Peptidase, M23B family; Identified by match to protein family HMM PF01551.
 
  
 0.734
CYA_1895
Peptidase, M23B family; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551.
 
  
 0.579
rpoZ
Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
       0.575
CYA_0151
Peptide/opine/nickel ABC transporter (PepT) family, permease protein; Identified by similarity to SP:P26904; match to protein family HMM PF00528.
     
 0.549
CYA_0150
Peptide/opine/nickel ABC transporter (PepT) family, permease protein; Identified by similarity to SP:P42062; match to protein family HMM PF00528.
     
 0.544
CYA_0152
Peptide/opine/nickel uptake ABC transporter (PepT) family, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
     
 0.541
CYA_0149
Peptide/opine/nickel ABC transporter (PepT) family, substrate-binding protein; Identified by match to protein family HMM PF00496.
       0.535
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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