Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
CYA_0266Conserved hypothetical protein; Identified by match to protein family HMM TIGR02450. (89 aa)    
Predicted Functional Partners:
CYA_1367
Conserved hypothetical protein.
  
     0.771
CYA_2204
Conserved hypothetical protein.
  
     0.721
pcyA
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
  
     0.708
CYA_2245
Conserved hypothetical protein; Identified by similarity to GB:BAC90426.1.
  
     0.693
CYA_2120
ATP synthase protein I; Identified by similarity to SP:P12403.
  
     0.679
CYA_0121
Conserved hypothetical protein; Identified by similarity to GB:BAD78811.1.
  
     0.673
CYA_0185
Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
  
     0.670
CYA_2047
Conserved hypothetical protein.
  
     0.663
CYA_2399
Conserved hypothetical protein; Identified by similarity to GB:BAD78649.1.
  
     0.657
CYA_2335
Conserved hypothetical protein; Identified by similarity to PIR:AF2318.
  
     0.652
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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