CYA_0288 protein (Synechococcus sp. JA33Ab) - STRING interaction network

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CYA_0288

Hypothetical protein; Identified by Glimmer2; putative. (66 aa)

Predicted Functional Partners:

CYA_0289

0.576

CYA_0290

0.576

CYA_0291

0.475

thiD

0.429

mrnC

0.421

Your Current Organism:

Synechococcus sp. JA33Ab

NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYA_0288	CYA_0289	CYA_0288	CYA_0289	Hypothetical protein; Identified by Glimmer2; putative.	Ferredoxin, 2Fe-2S; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR02008.	0.576
CYA_0288	CYA_0290	CYA_0288	CYA_0290	Hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by similarity to GB:BAD80164.1.	0.576
CYA_0288	CYA_0291	CYA_0288	CYA_0291	Hypothetical protein; Identified by Glimmer2; putative.	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.475
CYA_0288	mrnC	CYA_0288	CYA_0292	Hypothetical protein; Identified by Glimmer2; putative.	RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.421
CYA_0288	thiD	CYA_0288	CYA_0287	Hypothetical protein; Identified by Glimmer2; putative.	Phosphomethylpyrimidine kinase; Identified by match to protein family HMM TIGR00097.	0.429
CYA_0289	CYA_0288	CYA_0289	CYA_0288	Ferredoxin, 2Fe-2S; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR02008.	Hypothetical protein; Identified by Glimmer2; putative.	0.576
CYA_0289	CYA_0290	CYA_0289	CYA_0290	Ferredoxin, 2Fe-2S; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR02008.	Conserved hypothetical protein; Identified by similarity to GB:BAD80164.1.	0.773
CYA_0289	CYA_0291	CYA_0289	CYA_0291	Ferredoxin, 2Fe-2S; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR02008.	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.641
CYA_0289	mrnC	CYA_0289	CYA_0292	Ferredoxin, 2Fe-2S; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR02008.	RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.549
CYA_0290	CYA_0288	CYA_0290	CYA_0288	Conserved hypothetical protein; Identified by similarity to GB:BAD80164.1.	Hypothetical protein; Identified by Glimmer2; putative.	0.576
CYA_0290	CYA_0289	CYA_0290	CYA_0289	Conserved hypothetical protein; Identified by similarity to GB:BAD80164.1.	Ferredoxin, 2Fe-2S; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR02008.	0.773
CYA_0290	CYA_0291	CYA_0290	CYA_0291	Conserved hypothetical protein; Identified by similarity to GB:BAD80164.1.	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.693
CYA_0290	mrnC	CYA_0290	CYA_0292	Conserved hypothetical protein; Identified by similarity to GB:BAD80164.1.	RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.628
CYA_0291	CYA_0288	CYA_0291	CYA_0288	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Hypothetical protein; Identified by Glimmer2; putative.	0.475
CYA_0291	CYA_0289	CYA_0291	CYA_0289	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ferredoxin, 2Fe-2S; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR02008.	0.641
CYA_0291	CYA_0290	CYA_0291	CYA_0290	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Conserved hypothetical protein; Identified by similarity to GB:BAD80164.1.	0.693
CYA_0291	mrnC	CYA_0291	CYA_0292	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.873
mrnC	CYA_0288	CYA_0292	CYA_0288	RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	Hypothetical protein; Identified by Glimmer2; putative.	0.421
mrnC	CYA_0289	CYA_0292	CYA_0289	RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	Ferredoxin, 2Fe-2S; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR02008.	0.549
mrnC	CYA_0290	CYA_0292	CYA_0290	RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	Conserved hypothetical protein; Identified by similarity to GB:BAD80164.1.	0.628

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