STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYA_0331Ycf65-like protein; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family. (99 aa)    
Predicted Functional Partners:
CYA_0813
Putative membrane proteinprotein; Identified by similarity to PIR:AH1843.
  
     0.773
psbP
Photosystem II oxygen evolving complex protein PsbP.
  
     0.768
CYA_0056
Identified by match to protein family HMM PF05768.
  
     0.767
CYA_1155
PRC-barrel domain protein; Identified by match to protein family HMM PF05239.
  
     0.759
CYA_2557
Ferredoxin-thioredoxin reductase, catalytic beta subunit; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
  
     0.756
CYA_0356
Conserved hypothetical protein; Identified by similarity to GB:BAD78263.1.
  
     0.755
CYA_2601
Ferredoxin-thioredoxin reductase, catalytic beta subunit; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
  
     0.755
CYA_2070
Conserved hypothetical protein; Identified by similarity to GB:BAC08024.1.
  
     0.747
CYA_0430
Conserved hypothetical protein; Identified by similarity to PIR:S76577.
  
     0.745
CYA_2577
Conserved hypothetical protein.
  
     0.744
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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