Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CYA_0340Conserved hypothetical protein; Identified by similarity to GB:BAD01972.1. (119 aa)    
Predicted Functional Partners:
CYA_0341
Conserved hypothetical protein; Identified by similarity to GB:BAB48108.1.
       0.480
CYA_0342
Conserved hypothetical protein; Identified by similarity to GB:BAC91744.1.
       0.466
CYA_0343
Identified by match to protein family HMM PF00012; Belongs to the heat shock protein 70 family.
       0.466
coaX
Putative transcriptional activator,Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family.
       0.447
CYA_0338
Conserved hypothetical protein; Identified by similarity to SP:Q8R8N9; match to protein family HMM PF01871.
       0.447
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
       0.447
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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