Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CYA_0479 | sasA | CYA_0479 | CYA_0637 | Response regulator; Identified by match to protein family HMM PF00072. | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.838 |
| CYA_0796 | sasA | CYA_0796 | CYA_0637 | DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.818 |
| CYA_0927 | sasA | CYA_0927 | CYA_0637 | DNA-binding response regulator, LuxR family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.898 |
| CYA_1214 | sasA | CYA_1214 | CYA_0637 | DNA-binding response regulator, LuxR family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.851 |
| CYA_1392 | sasA | CYA_1392 | CYA_0637 | DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.853 |
| CYA_1892 | sasA | CYA_1892 | CYA_0637 | DNA-binding response regulator RpaA; Identified by similarity to GB:AAD30120.2; match to protein family HMM PF00072; match to protein family HMM PF00486. | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.987 |
| CYA_2161 | sasA | CYA_2161 | CYA_0637 | Response regulator; Identified by similarity to SP:P43501; match to protein family HMM PF00072. | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.819 |
| CYA_2738 | CYA_2739 | CYA_2738 | CYA_2739 | Response regulator; Identified by match to protein family HMM PF00072. | Response regulator; Identified by match to protein family HMM PF00072. | 0.781 |
| CYA_2738 | sasA | CYA_2738 | CYA_0637 | Response regulator; Identified by match to protein family HMM PF00072. | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.820 |
| CYA_2739 | CYA_2738 | CYA_2739 | CYA_2738 | Response regulator; Identified by match to protein family HMM PF00072. | Response regulator; Identified by match to protein family HMM PF00072. | 0.781 |
| CYA_2739 | sasA | CYA_2739 | CYA_0637 | Response regulator; Identified by match to protein family HMM PF00072. | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.909 |
| kaiC | sasA | CYA_1900 | CYA_0637 | Circadian clock protein KaiC; Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction; Belongs to the KaiC family. | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.999 |
| sasA | CYA_0479 | CYA_0637 | CYA_0479 | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | Response regulator; Identified by match to protein family HMM PF00072. | 0.838 |
| sasA | CYA_0796 | CYA_0637 | CYA_0796 | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. | 0.818 |
| sasA | CYA_0927 | CYA_0637 | CYA_0927 | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | DNA-binding response regulator, LuxR family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. | 0.898 |
| sasA | CYA_1214 | CYA_0637 | CYA_1214 | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | DNA-binding response regulator, LuxR family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. | 0.851 |
| sasA | CYA_1392 | CYA_0637 | CYA_1392 | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | 0.853 |
| sasA | CYA_1892 | CYA_0637 | CYA_1892 | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | DNA-binding response regulator RpaA; Identified by similarity to GB:AAD30120.2; match to protein family HMM PF00072; match to protein family HMM PF00486. | 0.987 |
| sasA | CYA_2161 | CYA_0637 | CYA_2161 | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | Response regulator; Identified by similarity to SP:P43501; match to protein family HMM PF00072. | 0.819 |
| sasA | CYA_2738 | CYA_0637 | CYA_2738 | Adaptive-response sensory histidine kinase SasA; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | Response regulator; Identified by match to protein family HMM PF00072. | 0.820 |
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