STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYA_0686Cystine ABC transporter, permease protein; Identified by similarity to SP:P42200; match to protein family HMM PF00528; match to protein family HMM TIGR01726. (234 aa)    
Predicted Functional Partners:
CYA_0685
Cystine ABC transporter, cystine-binding protein; Identified by similarity to SP:P39174; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
 0.996
CYA_0228
Polar amino acid uptake ABC transporter (PAAT) family, ATP-binding protein, truncation; Identified by similarity to SP:P48243; match to protein family HMM PF00005.
 
 0.991
CYA_1285
Polar amino amino acid ABC transporter (PAAT) family, ATP-binding protein; Identified by similarity to SP:Q52815; match to protein family HMM PF00005.
 
 0.976
CYA_2674
Polar amino acid ABC transporter (PAAT) family, amino acid-binding protein; Identified by similarity to SP:P02911; match to protein family HMM PF00497.
 
 0.957
CYA_2814
Amino acid transporter, amino acid-binding protein; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.835
CYA_1282
Polar amino amino acid ABC transporter (PAAT) family, permease protein; Identified by similarity to SP:Q52814; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
  
 
0.716
CYA_1283
Polar amino amino acid ABC transporter (PAAT) family, permease protein; Identified by similarity to SP:Q52813; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
0.696
CYA_1284
Polar amino amino acid ABC transporter (PAAT) family, amino acid-binding protein; Identified by similarity to SP:Q52812; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.656
cysA
Sulfate transport system ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
 
 
  0.437
CYA_1209
Hydrophobic amino acid uptake transporter (HAAT) ABC transporter family, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
   
 0.420
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.