STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYA_0701Hypothetical protein; Identified by Glimmer2; putative. (168 aa)    
Predicted Functional Partners:
CYA_2787
Conserved hypothetical protein; Identified by similarity to PIR:S74730.
  
     0.763
CYA_0013
Conserved hypothetical protein.
  
     0.761
CYA_0356
Conserved hypothetical protein; Identified by similarity to GB:BAD78263.1.
  
     0.758
CYA_1247
Conserved hypothetical protein; Identified by match to protein family HMM PF06485.
  
     0.746
psaE
Photosystem I reaction center subunit IV; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
     0.742
CYA_2736
Conserved hypothetical protein; Identified by similarity to PIR:AI1923; match to protein family HMM PF02325.
  
     0.737
CYA_2036
Conserved hypothetical protein; Identified by similarity to GB:BAC91704.1.
  
     0.736
psbW
Photosystem II reaction center protein PsbW; Identified by similarity to SP:Q55356; match to protein family HMM PF03912; Belongs to the Psb28 family.
  
     0.735
thf1
Conserved hypothetical protein; May be involved in photosynthetic membrane biogenesis.
  
     0.727
psaL-2
Photosystem I reaction center subunit XI; Identified by match to protein family HMM PF02605.
  
     0.706
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.