Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
gene fusions
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CYA_0782Putative membrane-bound protease; Identified by match to protein family HMM PF01841. (788 aa)    
Predicted Functional Partners:
CYA_2265
Conserved hypothetical protein; Identified by similarity to GB:CAD78920.1; match to protein family HMM PF01882.
  
 0.855
CYA_1224
ATPase, AAA family; Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.
 
  
 0.806
CYA_0783
Hypothetical protein; Identified by Glimmer2; putative.
       0.493
CYA_0781
Alkaline phosphatase; Identified by match to protein family HMM PF00245; Belongs to the alkaline phosphatase family.
       0.425
uvrA
Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.418
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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