STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYA_0833Conserved hypothetical protein; Identified by similarity to GB:BAC09852.1. (159 aa)    
Predicted Functional Partners:
CYA_0831
V4R domain protein; Identified by match to protein family HMM PF02830.
 
     0.917
CYA_0834
V4R domain protein.
 
     0.911
CYA_0522
V4R domain protein; Identified by match to protein family HMM PF02830.
 
     0.787
bchJ
Putative bacteriochlorophyll 4-vinyl reductase; Identified by match to protein family HMM PF02830.
 
     0.787
CYA_0526
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00111.
 
     0.787
CYA_1946
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00111.
 
     0.786
CYA_0590
Conserved domain protein.
  
     0.774
CYA_0066
FHA domain protein; Identified by match to protein family HMM PF00498.
  
     0.638
CYA_0832
Conserved domain protein.
       0.625
CYA_0429
FHA domain protein; Identified by match to protein family HMM PF00498.
  
     0.600
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
Server load: medium (62%) [HD]