cas6 protein (Synechococcus sp. JA33Ab) - STRING interaction network

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Score

cas6

CRISPR-associated protein Cas6; Identified by match to protein family HMM TIGR01877. (383 aa)

Predicted Functional Partners:

crm2-1

0.822

csx10

0.786

CYA_0874

0.783

CYA_0876

0.778

CYA_0881

0.778

CYA_0877

0.775

CYA_0598

0.685

CYA_2402

0.637

CYA_1572

0.604

CYA_2693

0.594

Your Current Organism:

Synechococcus sp. JA33Ab

NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYA_0598	CYA_0874	CYA_0598	CYA_0874	Conserved domain protein.	Putative CRISPR-associated RAMP protein; Identified by similarity to PIR:AC1990; match to protein family HMM PF03787; match to protein family HMM TIGR02581.	0.728
CYA_0598	CYA_0876	CYA_0598	CYA_0876	Conserved domain protein.	CRISPR-associated RAMP protein; Identified by match to protein family HMM PF03787.	0.706
CYA_0598	CYA_0877	CYA_0598	CYA_0877	Conserved domain protein.	CRISPR-associated RAMP protein, SSO1426 family; Identified by match to protein family HMM PF03787; match to protein family HMM TIGR02581.	0.614
CYA_0598	CYA_0881	CYA_0598	CYA_0881	Conserved domain protein.	CRISPR-associated RAMP protein; Identified by match to protein family HMM PF03787.	0.715
CYA_0598	CYA_1572	CYA_0598	CYA_1572	Conserved domain protein.	Conserved hypothetical protein.	0.697
CYA_0598	CYA_2693	CYA_0598	CYA_2693	Conserved domain protein.	Conserved hypothetical protein; Identified by similarity to PIR:AD2030.	0.747
CYA_0598	cas6	CYA_0598	CYA_0883	Conserved domain protein.	CRISPR-associated protein Cas6; Identified by match to protein family HMM TIGR01877.	0.685
CYA_0598	crm2-1	CYA_0598	CYA_0882	Conserved domain protein.	CRISPR-associated protein, Crm2 family; Identified by match to protein family HMM TIGR01872; match to protein family HMM TIGR02577.	0.724
CYA_0598	csx10	CYA_0598	CYA_0880	Conserved domain protein.	CRISPR-associated RAMP protein, Csx10 family; Identified by match to protein family HMM PF03787; match to protein family HMM TIGR02674.	0.686
CYA_0874	CYA_0598	CYA_0874	CYA_0598	Putative CRISPR-associated RAMP protein; Identified by similarity to PIR:AC1990; match to protein family HMM PF03787; match to protein family HMM TIGR02581.	Conserved domain protein.	0.728
CYA_0874	CYA_0876	CYA_0874	CYA_0876	Putative CRISPR-associated RAMP protein; Identified by similarity to PIR:AC1990; match to protein family HMM PF03787; match to protein family HMM TIGR02581.	CRISPR-associated RAMP protein; Identified by match to protein family HMM PF03787.	0.955
CYA_0874	CYA_0877	CYA_0874	CYA_0877	Putative CRISPR-associated RAMP protein; Identified by similarity to PIR:AC1990; match to protein family HMM PF03787; match to protein family HMM TIGR02581.	CRISPR-associated RAMP protein, SSO1426 family; Identified by match to protein family HMM PF03787; match to protein family HMM TIGR02581.	0.922
CYA_0874	CYA_0881	CYA_0874	CYA_0881	Putative CRISPR-associated RAMP protein; Identified by similarity to PIR:AC1990; match to protein family HMM PF03787; match to protein family HMM TIGR02581.	CRISPR-associated RAMP protein; Identified by match to protein family HMM PF03787.	0.866
CYA_0874	CYA_1572	CYA_0874	CYA_1572	Putative CRISPR-associated RAMP protein; Identified by similarity to PIR:AC1990; match to protein family HMM PF03787; match to protein family HMM TIGR02581.	Conserved hypothetical protein.	0.441
CYA_0874	CYA_2693	CYA_0874	CYA_2693	Putative CRISPR-associated RAMP protein; Identified by similarity to PIR:AC1990; match to protein family HMM PF03787; match to protein family HMM TIGR02581.	Conserved hypothetical protein; Identified by similarity to PIR:AD2030.	0.658
CYA_0874	cas6	CYA_0874	CYA_0883	Putative CRISPR-associated RAMP protein; Identified by similarity to PIR:AC1990; match to protein family HMM PF03787; match to protein family HMM TIGR02581.	CRISPR-associated protein Cas6; Identified by match to protein family HMM TIGR01877.	0.783
CYA_0874	crm2-1	CYA_0874	CYA_0882	Putative CRISPR-associated RAMP protein; Identified by similarity to PIR:AC1990; match to protein family HMM PF03787; match to protein family HMM TIGR02581.	CRISPR-associated protein, Crm2 family; Identified by match to protein family HMM TIGR01872; match to protein family HMM TIGR02577.	0.929
CYA_0874	csx10	CYA_0874	CYA_0880	Putative CRISPR-associated RAMP protein; Identified by similarity to PIR:AC1990; match to protein family HMM PF03787; match to protein family HMM TIGR02581.	CRISPR-associated RAMP protein, Csx10 family; Identified by match to protein family HMM PF03787; match to protein family HMM TIGR02674.	0.866
CYA_0876	CYA_0598	CYA_0876	CYA_0598	CRISPR-associated RAMP protein; Identified by match to protein family HMM PF03787.	Conserved domain protein.	0.706
CYA_0876	CYA_0874	CYA_0876	CYA_0874	CRISPR-associated RAMP protein; Identified by match to protein family HMM PF03787.	Putative CRISPR-associated RAMP protein; Identified by similarity to PIR:AC1990; match to protein family HMM PF03787; match to protein family HMM TIGR02581.	0.955

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