Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CYA_0905Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (222 aa)    
Predicted Functional Partners:
CYA_0185
Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
  
     0.761
CYA_0014
Identified by match to protein family HMM PF05419.
  
     0.737
CYA_2406
Conserved hypothetical protein; Identified by similarity to GB:BAC88790.1; match to protein family HMM PF06799.
  
     0.737
CYA_2853
CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517.
  
     0.728
CYA_1571
Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.
  
     0.710
CYA_2245
Conserved hypothetical protein; Identified by similarity to GB:BAC90426.1.
 
     0.699
CYA_0122
Conserved hypothetical protein; Identified by similarity to PIR:AD2369.
  
     0.698
CYA_1184
Conserved domain protein.
 
     0.697
CYA_0121
Conserved hypothetical protein; Identified by similarity to GB:BAD78811.1.
  
     0.693
CYA_2047
Conserved hypothetical protein.
  
     0.688
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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